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High-Yield Medical Virology Summary: Complete Virus List

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Master Medical Virology with this High-Yield Summary Guide! This 18-page "Viruses List" is an expertly organized study resource designed for medical students to master the complexities of virology. It breaks down major viral families into structured tables, focusing on the essential details required for medical school finals and USMLE Step 1 & 2 preparation. What’s inside? Comprehensive coverage of all clinically significant viruses, including: DNA Viruses: Herpesviruses (HSV-1, HSV-2, VZV, CMV, EBV, HHV-6, HHV-8), Poxviruses (Smallpox, Molluscum contagiosum), Hepadnaviruses (HBV), Adenoviruses, and Parvoviruses. RNA Viruses: Orthomyxoviruses (Influenza), Paramyxoviruses (Measles, Mumps, PIV, RSV), Coronaviruses (SARS, MERS, COVID-19), Togaviruses (Rubella, Chikungunya), Flaviviruses (HCV, Yellow Fever, Dengue, Zika, West Nile), Picornaviruses (Polio, Coxsackie, HAV), and Retroviruses (HIV). Hemorrhagic & Zoonotic Viruses: Ebola, Marburg, and Rabies. Key Features for Each Virus: Morphology: Genome type (ssRNA/dsDNA), envelope status, and capsid symmetry. Life Cycle & Pathogenesis: Mechanisms of entry, replication, and tissue tropism. Clinical Signs & Symptoms (S&S): Classic presentations, from "slapped cheek" syndrome to complex AIDS-defining illnesses. Diagnosis (Dx): Key lab tests, including PCR, serology (IgM/IgG), and histological markers (e.g., Negri bodies or "owl-eye" inclusions). Treatment & Prevention: First-line antivirals (Acyclovir, HAART) and available vaccine protocols (MMR, DPT). This guide eliminates the need to cross-reference multiple textbooks by consolidating morphology, transmission, and clinical management into one streamlined resource.

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Virus
Organism Herpes simplex virus-1 (HSV-1)
Disease Herpes – acute gingivostomatitis, recurrent herpes labialis (cold sores), keratoconjunctivitis (keratitis) & encephalitis
Morphology Herpesviruses – Double stranded (ds) DNA enveloped virus (along w poxvirus) & hepadnaviruses
Icosahedral core w lipoprotein envelope
X polymerase
Epidemiology Most occurs during childhood
MOT Saliva & asymptomatic shedding
Life cycle Replicate in skin/mucous membrane
HSV-1 binds to heparan sulfate on cell surface then nectin receptor
➢ Fusion w cell membrane
➢ Protein release into cytoplasm
Viral nucleocapsid transported to nucleus
➢ VP-16 activate transcription of viral IE gene
➢ IE protein later activate synthesis of DNAP & thymidine kinase
Pathogenesis Progeny virus infects adjacent neurons & migrates up axon by retrograde axonal flow to neuron nucleus – viral DNA x integrate into human DNA but remain as episome in
nucleus
➢ HSV become latent in sensory ganglion cells
➢ HSV-1 specifically at trigeminal ganglia
Virus reactivated from latent by inducers
➢ Virus migrate down neuron
➢ Replicate in skin causing lesions
Vesicles w serous fluid w viral particles – multinucleated giant cell at base of lesion
➢ Progress to erythema → papules → ulcers → crust
➢ Prodromal itching/tingling can occurs
S&S Painful vesicle lesions generally above waist (mainly on face)
➢ Gingivostomatitis – fever, irritability, vesicles (self-limiting)
➢ Orolabial herpes
➢ Keratoconjunctivitis – corneal ulcers → scarring & blindness
➢ Encephalitis – (necrotic lesion in temporal lobe) headache, vomiting, seizure, altered mental status
➢ Herpetic whitlow – pustular lesion
➢ Herpes gladiatorum
➢ Eczema herpeticum/Kaposi varicelliform eruption
➢ Disseminated infection – esophagitis, pneumonia in IC
➢ Erythema multiforme/Steven Johnson syndrome – allergic reaction to infection/drugs, bull-eye lesion (macular/popular) symmetrically on trunk, hands & feet
Complication Lifelong latent infection
Blindness
Encephalitis
Dx PCR (more common)
NAAT
Viral culture
Skin lesion scrap under Tzanck smear
Direct fluorescent antibody (DFA) test
Diff Dx HSV-2
Tx Acyclovir (DOC)
Penciclovir/docosanol – recurrent in IC

Prevention Avoid contact
X vaccine


Organism Herpes simplex virus-2 (HSV-2)
Disease Herpes – genital herpes, neonatal encephalitis & aseptic meningitis (no pus)
Morphology Herpesviruses, icosahedral core w lipoprotein envelope, x polymerase
Epidemiology Commonly after puberty
Recurrences is more common
MOT Sexual contact
Asymptomatic shedding
RF ➢ Promiscuous
Life cycle = as HSV-1
Pathogenesis = as HSV-1, however: -
➢ HSV-2 stays latent especially in the lumbar & sacral ganglion
S&S Painful vesicular lesion below the waist (now due to oral-genital practice S & S on mouth too)
➢ Erythema multiform/Steven Johnson syndrome
➢ Genital herpes – painful vesicular lesion (more severe in 1* disease), fever & inguinal adenopathy
➢ Neonatal herpes – mild local lesion to asymptomatic
➢ Aseptic meningitis – mild, self-limiting disease w few sequelae
Dx = as HSV-1
Tx Acyclovir
Prevention Valacyclovir/famciclovir – recurrence suppression
C-section for infected mothers
Circumcision


Organism Varicella zoster virus (VZV)
Disease Varicella / chickenpox
Zoster / shingles – recurrent infection
Morphology Herpesviruses
Single serotype
MOT Respiratory droplets / direct contact w lesion
RF ➢ IC
Life cycle = to HSV

,Pathogenesis Infection URT mucosa
➢ Spread to skin via blood
Typical vesicular rash occurs (multinucleated giant cell w intranuclear inclusion at base of lesion)
➢ Virus infect sensory neurons & retrograde axonal flow into dorsal root ganglia
Here the virus become latent
➢ Reactivated due to inducers
Vesicular skin lesions & nerve pain of zoster
S&S Varicella
➢ Fever & malaise
➢ Papulovesicular rash on trunks & spread to head & extremities
➢ Rash → papules → vesicles → pustules → crust
➢ Pruritus on vesicles
Zoster
➢ Painful vesicles along sensory nerve of head/trunk
➢ Postherpetic neuralgia (PNH)
Complication Varicella pneumonia & encephalitis
Reye’s syndrome – encephalopathy & liver degeneration
Dx PCR
DFA
Tzanck smear
Viral culture
Serological test
Tx X antiviral
Acyclovir to ↓symptoms prior to symptoms manifestation
Foscarnet – acyclovir resistant strain
Analgesic for PNH
Prognosis Immunity is lifelong w infection only occurring once in a lifetime
Prevention 2 vaccines
➢ Variva – prevent varicella (live, attenuated)
For >1Y
➢ Shingrix – prevent shingles (recombinant w envelope glycoprotein)
For any age

Varicella zoster immune globulin for chemoprophylaxis


Organism Cytomegalovirus (CMV)
Disease Cytomegalic inclusion disease, congenital abnormalities, heterophil-negative mononucleosis
Morphology Herpesviruses
Single serotype with many genotype
Virulence Anti-HLA class 1 protein – prevent CD8+ cell from killed CMV infected cells
MicroRNA – prevent translation of class I MHC protein
Chemokine receptor like protein – binds to chemokines & prevent signal for immune cell to migrate to infection site
Immunosuppressive effect – inhibit T cells
Epidemiology Most common cause of congenital abnormalities
Congenital abnormalities more common during the 1st trimester
MOT ➢ Thru placenta
➢ Vertical transmission
➢ Breast milk
➢ Saliva
➢ Sexually transmitted
➢ Blood transfusion
➢ Organ transplant
Usually asymptomatic exp IC
Life cycle = to HSV
Pathogenesis Fetal infection cause cytomegalic inclusion disease
➢ Multinucleated giant cell w intracellular inclusion

CMV enters into latent stage in monocytes, kidneys & reactivated when ↓CMI
S&S Congenital abnormalities in infant: -
➢ Microcephaly
➢ Seizure
➢ Deafness
➢ Jaundice
➢ Purpura – blue berry muffin lesion
➢ Hepatosplenomegaly
➢ Mental retardation
Adults: -
➢ Heterophil negative mononucleosis (fever, lethargy, abnormal lymphocytes in peripheral blood smear)
IC: -
➢ Pneumonitis
➢ Esophagitis
➢ Hepatitis
➢ Intractable colitis
➢ Retinitis → blindess
➢ Anemia & thrombocytopenia
Dx PCR for CMV DNA/viral mRNA
Culture in shell vials w IF Ab
IF Ab & histologic staining – giant cells w owl eye inclusion bodies
Serological IgM test
Tx Ganciclovir - IC & AIDs
Valganciclovir - CMV retinitis
Foscarnet – resistant strain
Prevention X vaccine
Ganciclovir for suppression

, Infected infant isolated


Organism Epstein Barr Virus (EBV)
Disease Infectious mononucleosis, Burkitt’s lymphoma, B-cell lymphomas, nasopharyngeal CA, hairy leukoplakia, post-transplant lymphoproliferative disorder (PTLD) &
hemophagocytic lymphohistiocytosis (HLH)
Morphology Herpesviruses
Has viral capsid Ag (VCA)
Epidemiology Commonly in low SES
MOT ➢ Saliva
Usually asymptomatic (early stage)
Life cycle = to HSV
Enter B-lymphocytes at C3 receptor
Pathogenesis Infection lymphoid, pharynx epithelial cells
➢ Spread to blood & infect B-lymphocytes
➢ Remain latent in cell
Immune response to VCA
S&S Infectious mononucleosis
➢ Fever
➢ Sore throat
➢ Lymphadenopathy
➢ Splenomegaly
➢ Anorexia & lethargy
➢ Hepatitis
➢ Encepahlitis
Hairy leukoplakia (common in IC)
➢ Whitish
➢ Non-malignant lesion w irregular hairy surface on lat side of tongue
Complication X-linked lymphoproliferative syndrome
➢ Children w this inherited immunodeficiency gets fatal infectious mononucleosis if infected w EBV
PTLD is due to B-cell lymphoma following bone marrow/organ transplant

HLH affects children
➢ Fever
➢ Hepatosplenomegaly
➢ Cytopenias
Dx Serology test – IgM VCA
EVB specific Ab test
Monospot test – detect heterophil Ab (<common)
Blood examination
➢ Absolute lymphocytosis
➢ Atypical lymph w expanded nucleus & abundant vacuolated cytoplasm
PCR
Tx X antiviral
Prevention X vaccine


Organism Human Herpes virus-6 (HHV-6)
Disease Roseola infantum (exanthem subitem)
Morphology Herpesviruses
Epidemiology Common in children
Encephalitis common in patient receiving stem-cell transplant
Pathogenesis Lymphotropic infecting both T & B cells
➢ Remain latent & reactivate during times of ↓CMI
S&S ➢ Sudden high fever
➢ When fever is gone – transient macular/maculopapular erythematous rash on face & trunk
In IC: -
➢ Pneumonitis
➢ Encephalitis
➢ Hepatitis
Dx PCR for viral DNA - ↑>x4 rise in Ab
Tx X antiviral
Ganciclovir for IC
Prevention X vaccine


Organism HHV-8
Disease Kaposi sarcoma, 1* effusion lymphoma, multimeric Castleman disease & inflammatory cytokine syndrome asso w HIV
Morphology Herpesviruses
6 main subtypes in different geographical regions
Virulence Latency associated nuclear Ag (LANA) – inhibit p53 gene transcription
Cyclin D viral gene – overrides cell cycle growth
Protein gene – inhibit Fas death pathway allowing infected cell to attach CD8+ cell
Epidemiology KS is most common cancer asso w HIV
MOT ➢ Saliva
➢ Sexual intercourse
➢ Organ transplant
Life cycle Both lytic & latent cycle
➢ Lytic produce infective virus
➢ Latent involve in malignant transformation
Pathogenesis Malignancy of vascular endothelial cells
➢ Many spindle shaped cell & RBC
HHV-8 first inactivate TSG by producing LANA inactivating p53
➢ Resulting in malignant transformation

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