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BIOC20 Final Exam Virology 2026 – 220+ Exam Questions and Detailed Answers

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This document contains over 220 comprehensive exam questions and detailed answers covering the full BIOC20 virology curriculum. The material thoroughly reviews negative-strand RNA viruses, positive-strand RNA viruses, double-stranded RNA viruses, double-stranded DNA viruses, and retroviruses, with an in-depth focus on influenza virus replication, reovirus transcription mechanisms, adenovirus gene regulation and DNA replication, and retroviral reverse transcription and integration. It systematically explains viral genome organization, polymerase functions, cap-stealing mechanisms, nuclear transport signals, host shutoff strategies, viral protein functions, and replication decision pathways. The study guide provides detailed step-by-step breakdowns of complex processes including influenza cap-snatching and stuttering transcription, nucleocapsid assembly and nuclear export, reovirus moving template transcription strategy and RNA capping, adenovirus S-phase induction via E1A and p53 modulation, DNA replication using pre-terminal protein primers, and retroviral reverse transcription with long terminal repeat formation. Conceptual comparisons between transcription vs replication pathways, proofreading limitations, RNA processing differences, and viral manipulation of host transcription and translation machinery are thoroughly covered. The content aligns closely with upper-level molecular virology and viral replication textbooks such as Principles of Virology by Flint et al. and Fields Virology, particularly sections on orthomyxoviruses, reoviruses, adenoviruses, and retroviruses. This document is especially relevant for: Biochemistry majors Molecular Biology students Microbiology students Life Sciences students Pre-med students studying virology Upper-year undergraduate virology courses Students preparing for comprehensive final exams in viral replication and molecular virology Keywords: negative strand RNA viruses, positive strand RNA viruses, influenza replication cycle, cap stealing mechanism, hemagglutinin HA1 HA2, M2 ion channel, nucleocapsid RNP complex, nuclear localization signal NLS, stuttering transcription, poly U tract, reovirus ISVP core, moving template strategy, RNA capping enzymes, adenovirus E1A protein, S phase induction, histone acetyl transferase CBP P300, p53 regulation, viral DNA replication, pre terminal protein primer, retrovirus reverse transcriptase, long terminal repeats LTR, integrase function, proviral DNA integration, holder in due course, RNA dependent DNA polymerase, viral transcription vs replication

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BIOC20
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BIOC20

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BIOC20 Final Exam 2026 Exam
Questions and Answers | A+
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Negative strand RNA genomes - 🧠ANSWER ✔✔Single stranded


Cannot be directly translated

To make proteins, the negative strand must be used to make a

complimentary positive strand


How to convert negative strand to positive strand? - 🧠ANSWER ✔✔Original

genome (negative sense strand) -> conversion using RNA dependent RNA

polymerase -> complimentary positive sense strand

,Positive stranded RNA virus - 🧠ANSWER ✔✔Does not need an RNA

polymerase, can be directly translated and can produce RNA and make

RNA


What codes for the Viral RNA polymerase? - 🧠ANSWER ✔✔The Negative

stranded RNA virus codes for their own RNA polymerase (they do NOT use

the cell's polymerase bc it can only read DNA)


How does the RNA polymerase get created? - 🧠ANSWER ✔✔Negative

strand is accompanied by the RNA polymerase which reads the negative

strand and creates the positive strand. The positive strand can code for

multiple viral proteins (including the RNA polymerase) as well as more

complimentary negative strands


Ribonuceleo-protein complex - 🧠ANSWER ✔✔Negative strand RNA

genome + RNA polymerase (RNA polymerase is made up of diff

components)

Negative Stranded RNA Viral Families (list 5) - 🧠ANSWER

✔✔Paramyxoviruses


Rhabdoviruses

Filoviruses

,Bunyaviruses

Influenza viruses (umbrella virus)


Influenza Virus Proteins (individual segments) - 🧠ANSWER ✔✔Entire

genome exists as 8 individual segments

Each segment codes for a different protein

What does the RNA polymerase complex consist of? - 🧠ANSWER

✔✔Complex consists of PA, PB1, and PB2


What do Influenza Virus Genome segments 1,2 and 3 code for? -

🧠ANSWER ✔✔Segments 1,2,3 code for the components that make up the

RNA polymerase complex


What does Segment 4 code for? - 🧠ANSWER ✔✔Genome segment 4

corresponds to hemaglutinin (one of the enveloped proteins)


What does Segment 5 code for - 🧠ANSWER ✔✔nucleocapsid proteins


What does segment 6 code for - 🧠ANSWER ✔✔Neuraminidase (another

viral protein)


What does segment 7 code for - 🧠ANSWER ✔✔2 diff proteins:




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, 1) M2 (ion channel)

2) M1 matrix protein


What does segment 8 code for? - 🧠ANSWER ✔✔NS2 proteins


Is the Influenza virus enveloped or non enveloped? - 🧠ANSWER

✔✔Influenza is an enveloped virus


What is a nucleocapsid in Influenza? - 🧠ANSWER ✔✔When the genome

binds to the capsid proteins. However, for influenza, we refer to the capsid

protein itself as a nucleocapsid protein (NP)


How does Influenza enter a cell - 🧠ANSWER ✔✔Dock at target cell and is

taken in by vesicles that pinch inwards from plasma membrane. Now the

virion is within an endosome and as the endosome matures, the enveloped

virus fuses with the endosomal membrane to dump its nucleocapsid out

into the cytoplasm


How does Influenza fusion work? - 🧠ANSWER ✔✔Viral envelope and

envelope protein attached to envelope -> protein undergoes conformational

change after being exposed to acidic environment -> fusion peptides are

exposed and inserted into the endosomal membrane -> more viral

envelope proteins cluster together and fuse as well -> jack-knife

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