Give an example of heritable and non-heritable variation - Answers Eye color (heritable) and tattoos
(non-heritable)
Give an example of random and non-random events during biological evolution - Answers Mutation
(random), survival under certain environmental conditions (non-random)
What happens to the rate of evolution in small populations? - Answers Rate gets higher, evolution
accelerates
What are the three key ingredients of biological evolution? - Answers Replicating entities, heritable
variation, differential reproduction
What is the difference between somatic cells and germ cells? - Answers Somatic cells are the majority
of the cells in the body, germ cells are the ones that can give rise to gametes
Can somatic mutations be passed on to the next generation? - Answers No, only germ line mutations
can
Are most mutations dangerous to the survival of the individual in which they occur? - Answers No,
most mutations appear neutral
Why is the evolutionary tree of life made up of branches? - Answers Because most of the time, once
two populations have stopped exchanging DNA, they become incompatible and cannot exchange DNA
again
Why is it impossible to place viruses on the tree of life? - Answers Viruses do not contain any DNA
that can be directly compared to the DNA in cellular life forms
What does convergent evolution mean? - Answers Independent evolution leading to similar outcomes
(ie. spindle-shaped swimmers, caffeine)
What four different perspectives on disease can be considered? - Answers Patient, doctor/care
provider, evolving pathogen, evolving host
Give a proximate mechanism for disease - Answers Mutation in important immune genes (ex.
interleukin 10)
Give an evolutionary explanation for disease - Answers Hygiene hypothesis
What is the size of a human cell, a bacterium, and that of a virus? - Answers Human (30 micrometers),
bacterium (3 micrometers), virus (100 nanometers)
Can a mutation in a single gene cause disease? - Answers Yes, there are over 4000 human diseases
caused by a single gene mutation!
What is the pathogen that causes malaria? - Answers Several species of the protozoan called
Plasmodium.
What is the pathogen that causes tuberculosis? - Answers The bacterium Mycobacterium
tuberculosis.
What is the pathogen that causes HIV/AIDS? - Answers The HIV virus, a lentivirus belonging to the
group of retroviruses.
Why is the name SIV a misnomer? - Answers Because the virus does not cause immunodeficiency in
most non-human primates
Why is it impossible to rid the world of influenza A virus? - Answers Because there is a huge and
diverse reservoir of influenza viruses in wild water birds
What is unusual about prion diseases? - Answers They are caused by a mis-folded protein, not by a
living, replicating organism. A mis-folded protein from outside the body causes additional mis-folding
of the patient's own prion molecules (mad cow disease).
What is the origin of the word vaccination? - Answers The latin word vacca = cow, given that cowpox
was used to immunize humans against smallpox
What is the difference between variolation and vaccination? - Answers Variolation is immunization
using smallpox virus, vaccination is immunization against smallpox using the related cow pox virus.
What is the difference between variolation and vaccination? - Answers Variolation (inoculation) uses
scabs from smallpox patients to immunize naive persons, while vaccinations use scabs from cows
infected by cow pox to immunize against smallpox. Vaccination has since been applied to other
methods of immunization.
How long is the haploid genome of each of our cells and how many "letters" base pairs does it
contain? - Answers About 1 meter long and it contains 3 billion bp.
What does chromatin consist of? - Answers Histone and non-histone proteins and DNA
,Give three examples of chromosomal changes during evolution? - Answers Fusion, inversion,
reciprocal translocation
How can different parts of the genome have different histories? - Answers Genetic recombination
breaks apart and brings together different parts of the genome. The further apart on a chromosome
two segments of DNA are, the likelier that these do not share the same precise history.
What 2 different parts of our genomes do not get reshuffled but are rather inherited from one parent
only? - Answers Mitochondrial DNA and most of the Y-chromosome
What are the four major classes of biomolecules? - Answers Nucleic acids, proteins, lipids and glycans
How many pieces of DNA are there in the nuclear genome of a human? - Answers 46, visible as
chromosome when a cell is dividing
What is a haplotype? - Answers A unique combination of DNA variants along the same strand of DNA
What are post-translational modifications? - Answers Changes to protein molecules after these have
been synthesized (translated from mRNA).
What could be the advantage of our genomes having multiple versions (copies) of the same gene (e.g.
hemoglobin)? - Answers Slightly different variants of the same gene can be used at different times
during development and life (embryonic, fetal, adult)
What is an enhancer (in the genome)? - Answers A stretch of DNA that interacts with transcription
factors and the promoter of genes to regulate their expression.
Give two examples of RNA that is functional despite the fact that it does not code for a protein -
Answers Ribosomal RNA is part of the RNA translating machinery of a cell, micro RNA takes on a 3 D
fold and can interact with proteins to modify gene expression
Give four characteristics of the genome that can affect gene expression? - Answers Chromatin
remodeling, histone modification, DNA methylation, non-coding and micro RNA (+RNA binding
proteins, DNA-binding proteins = transcription factors)
What does the queen bee have to do with epigenetic? - Answers Enzymes acting on histone
modifications in the royal jelly produced by workers bees and fed to the developing queen larva cause
the same egg to become a queen rather than a worker.
How can the chemical modification of histone proteins influence gene activity? - Answers Histone
modifications can change the accessibility of gene expression machinery to DNA.
What is the ratio of human to microbial cells in and on your body? - Answers Roughly 1 to 1.
How many times smaller than you is an average bacterium? - Answers One million times.
How are microbiota like micro Serengetis? - Answers They represent complex communities of
multiple species
How could human hosts benefit from genes in the genome of their microbiome? - Answers Microbial
enzymes can digest food and generate vitamins
Name two ways in which biological and cultural inheritance are similar and two ways in which they
differ - Answers Both types of inheritance represent transmission of information, both are affected by
change over time; cultural inheritance does not include the inheritance of genetic information and it
can spread horizontally or even from younger to older generations.
Give an example of an important human technology that does not fossilize? - Answers Fiber
technology, ropes, strings, baskets, fabrics.
How can personal names and language affect individual behavior? - Answers It allows for reputations
as the actions of the named reported to a wide social network and affect that individual's social
standing
Which of the modern online services relies heavily on reputation? - Answers A. Amazon B. Ebay C. Air
B&B
What is aneuploidy? - Answers Deviation from normal chromosome numbers
Why were bacteria and protozoa discovered long before viruses? - Answers Because viruses are sub-
cellular parasites that cannot be seen by light microscopy
What is Koch's postulates? - Answers The notion that proof for pathogenesis by an agent requires that
the microorganism must be found in abundance in all organisms suffering from the diseases, but
should not be found in healthy organisms. The microorganism must be isolated from a diseased
organism and grow in pure culture. The cultured microorganism should cause disease when
introduced into a healthy organism. The microorganism must be reisolated from the inoculated,
diseased experimental host and identified as being identical to the original specific causative agent.
List four different types of host defenses - Answers Mucus barrier, skin, antimicrobial toxins, immune
cells
, What is horror autotoxicus? - Answers The horror of having one's own powerful immune system
unleashed against oneself.
How much larger is a human macrophage vs. a bacterium? - Answers 4 to 40 times larger.
How does the macrophage recognize the bacteria? - Answers By using innate immune receptors that
recognize pathogen associated molecular patterns (PAMPs).
How thick is human skin? - Answers Around 2 mm
What is the total surface of the human skin? - Answers 2 square meters without the folds, 25 square
meters with.
What is mucus made of? - Answers Mucus is a hydrated biogel consisting mostly of hydrated, highly
glycosylated mucin glycoproteins, but also salts and anti-microbial proteins.
What is the BBB? - Answers A specially tight layer inside all the blood vessels in and around the brain?
What kind of information does the immune system process? - Answers Molecular information about
self and non-self, consisting of composition and shape of molecules and the patterns these form.
List two cell types in the body that lose their genomes as they mature - Answers RBC, platelets, lens
cells of the eyes
List three similarities between our immune system and the brain - Answers Similar number of cells,
long development after birth, process information
What are the innate immune receptors? - Answers Proteins made by a host organism (germ line
encoded, even in absence of immunization) that recognize molecular patterns on potential pathogens
and parasites.
How does the rich diversity of alleles at many of the genes encoding innate immune receptors
become apparent? - Answers Individual humans can react very differently to the same pathogens
How can liquid blood rapidly form a clot? - Answers Blood is super charged with proteins that can
react to contact with oxygen and form mesh works of fibers that can crosslink and entrap platelets,
thus forming a clot.
Horse shoe crabs and other invertebrates lack an adaptive immune system. How do these animals
protect themselves against infection? - Answers Their innate immune systems produce protective
proteins that recognize bacterial molecules.
What does clonal selection in the immune system refer to? - Answers B-cells that make antibodies
which bind antigens well, are allowed to replicate as clones, rapidly increasing the fraction of these B-
cells over other, that fail to produce such antibodies.
How does the adaptive immune system prevent cells from reacting against self? - Answers Developing
immune cells that recognize self too strongly are forced to undergo apoptosis.
How many protein chains make up a single antibody? - Answers Four, two light and two heavy chains.
Give three cell types involved in innate immunity and three involved in adaptive immunity. - Answers
Neutrophil, macrophage, basophil. B-cell, T-cell, T-helper cell.
What is the difference between MHC and HLA? - Answers HLA is the human MHC
How does human breast milk improve infant health? - Answers It contains prebiotics and that help the
infant gut be colonized by the right bacteria, probiotics in the form of bacteria, and it contains
maternal antibodies that attenuate infections in the infant, and it modulates infant immune
development.
What does SAMP stand for? - Answers Self associated molecular patterns.
Can you name four autoimmune diseases - Answers rheumathoid arthritis: self attack on joints
multiple sclerosis: self attack on central nervous system
type 1 diabetes: self attack on pancreatic islet cells that secrete insulin
inflammatory bowel disease: self attack on gut tissue and or associated microbes
What is the concept of friendly fire in immune responses? - Answers Immune responses can result in
damage to the "self", tissues, or processes of our own bodies.
What is a monoclonal antibody? - Answers A specific antibody made by one clone of B-cells (these can
be isolated and then mass-produced by introducing the DNA sequence encoding this specific antibody
into a cell line).
What is an example of a behavioral defense against infection in primates? - Answers Grooming
behavior, often reciprocal.
List 2 examples each of viral, bacterial, fungal, protozoan, helminth, and prion caused diseases. -
Answers Polio and flu, gonorrhea and TB, candidasis and valley fever, malaria and sleeping sickness,
schistosomiasis and elephantiasis, Kuru and Creutzfeldt Jakobs.