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Pre-lab #3 | Completed - University of California, Davis BIS 2C 2C

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Most often, eukaryotes call to mind large and conspicuous animals and plants, but there are many eukaryotes that are not visible to the naked eye. Recall from lab 2 that the word ‘microbe’ is used to refer to microscopic organisms in any of the domains and viruses. In lab 3, you will be introduced to microbial eukaryotes, a group that includes several disparate lineages with diverse ecology and life history. The occur in most habitats worldwide, are key players in symbiotic interactions, and cause multiple human diseases such as malaria, sleeping sickness, Chagas disease, and leishmaniasis among others. As with all eukaryotes, microbial eukaryotes have a nucleus, mitochondria, and a cytoskeleton. Some lineages also have chloroplasts that are used for photosynthesis. They can be unicellular, colonial, or multicellular and, paradoxically, some are relatively large- growing up to 30 meters in length (brown algae). Unlike the relatively uniform body morphologies of Bacteria and Archaea, microbial eukaryotes show a great diversity of body forms and associated morphology (Figure 3.1). In fact, aside from the characters that they share with all other eukaryotes, they do not have any unifying features. Given this variability, why are these organisms presented as a single group? Figure 3.1 Historically, microbial eukaryotes were referred to as protists (first organisms) primarily because they were small and did not fit into other recognizable groups of eukaryotes such as plants, animals, and fungi. Many of their features were also thought to be ‘primitive’, but recent research has shown this assumption to be far from correct. Interestingly, despite the attention that eukaryotes in general have had from biologists, relationships among the main lineages remain unresolved (Figure 3.2). Microbial eukaryotes include the eukaryotic lineages outside of Plantae and Opisthokonts, namely the Amoebozoans, Excavates, and the monophyletic group called RAS (Rhizaria, Stramenopiles, and Alveolates). Question 1. Figure 3.2 is a phylogeny that shows relationships among major lineages of eukaryotes. The ‘microbial eukaryotes’ are outlined in gray. Based on what you learned in lab 1, and assuming the relationships are correct, do ‘microbial eukaryotes’ form a monophyletic group? Explain. Microbial eukaryotes are not a monophyletic group as that would require plantae to be apart of the group, otherwise it is only paraphyletic. Your answer Figure 3.2 Diversity Question 2 (a-e). You are probably more familiar with microbial eukaryotes than you realize because many are associated with important human diseases. As an introduction to some of the organisms that you will study in lab, match the scientific names at left with the descriptions at right. Some clues are fairly obvious, but others may require judicious internet searches. Question 2.1. Euglena viridis B. This free-living green alga is common in streams and ponds. Question 2.2. Plasmodium vivax D. This organism is spread by mosquitoes and causes malaria. Question 2.3. Leishman

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Most often, eukaryotes call to mind large and conspicuous animals and plants, but there are many
eukaryotes that are not visible to the naked eye. Recall from lab 2 that the word ‘microbe’ is used to
refer to microscopic organisms in any of the domains and viruses. In lab 3, you will be introduced to
microbial eukaryotes, a group that includes several disparate lineages with diverse ecology and life
history. The occur in most habitats worldwide, are key players in symbiotic interactions, and cause
multiple human diseases such as malaria, sleeping sickness, Chagas disease, and leishmaniasis
among others.


As with all eukaryotes, microbial eukaryotes have a nucleus, mitochondria, and a cytoskeleton. Some
lineages also have chloroplasts that are used for photosynthesis. They can be unicellular, colonial, or
multicellular and, paradoxically, some are relatively large- growing up to 30 meters in length (brown
algae). Unlike the relatively uniform body morphologies of Bacteria and Archaea, microbial
eukaryotes show a great diversity of body forms and associated morphology (Figure 3.1). In fact,
aside from the characters that they share with all other eukaryotes, they do not have any unifying
features. Given this variability, why are these organisms presented as a single group?

Figure 3.1

, Historically, microbial eukaryotes were referred to as protists (first organisms) primarily because
they were small and did not fit into other recognizable groups of eukaryotes such as plants, animals,
and fungi. Many of their features were also thought to be ‘primitive’, but recent research has shown
this assumption to be far from correct. Interestingly, despite the attention that eukaryotes in general
have had from biologists, relationships among the main lineages remain unresolved (Figure 3.2).
Microbial eukaryotes include the eukaryotic lineages outside of Plantae and Opisthokonts, namely
the Amoebozoans, Excavates, and the monophyletic group called RAS (Rhizaria, Stramenopiles, and
Alveolates).

Question 1. Figure 3.2 is a phylogeny that shows relationships among
major lineages of eukaryotes. The ‘microbial eukaryotes’ are outlined
in gray. Based on what you learned in lab 1, and assuming the
relationships are correct, do ‘microbial eukaryotes’ form a
monophyletic group? Explain.
Microbial eukaryotes are not a monophyletic group as that would
require plantae to be apart of the group, otherwise it is only
paraphyletic.
Your answer
Figure 3.2

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