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BIOL 4100 EXAM 2 STUDY GUIDE QUESTIONS AND ANSWERS WITH COMPLETE SOLUTIONS VERIFIED LATEST UPDATE

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BIOL 4100 EXAM 2 STUDY GUIDE QUESTIONS AND ANSWERS WITH COMPLETE SOLUTIONS VERIFIED LATEST UPDATE Secretory and Endocytic pathway protein trafficking transporting vesicles and transporting membrane and soluble proteins from one membrane-bounded compartment to another. The transport vesicles collect cargo proteins in membrane budding from a donor compartment and deliver the cargo proteins to the next compartment by fusing with the target membrane. Secretory Pathway It involves the ER and is moving outward, your distributing soluble and membrane proteins that are synthesized in the rough ER to the final destination at the cells surface, this also includes secretion, and going into the lysosomes.It has two stages. ER to Golgi to Cell Surface to Endosomes to Lysosomes Endocytic Pathway · moving inward or taking something up from outside of the cell, ingestion and degradation of extracellular molecules, can involve a cell taking up a pathogen. Goes from plasma membrane to endosomes to lysosomes Golgi Key player in the biosynthetic secretory and endocytic pathway Functions of Golgi receiving transport vesicles from the ER, modifying proteins by glycosylation, and dispatching secretory proteins in vesicles bound for the extracellular space, PM (plasma membrane), or lysosome Golgi Cis, or forming face entry face where the proteins from the ER enter the Golgi Golgi Trans face exit face, where the proteins leave the Golgi and go into their destined place such as secretory vesicles, plasma membrane, or lysosomes How does the Golgi work? delivers proteins to the cell exterior via vesicles by unregulated secretion, secretory vesicles whose movement to the plasma membrane/cell exterior can be regulated (regulated secretion), or endosomes that mature into lysosomes Coat function concentrate transport proteins into specialized patches, and mold the forming vesicle into curved shape What are the three major coat types? COPI, COPII, and clathrin coats The three major types of transport vesicles each have? different types of protein coat that are formed by a reversible polymerization of a distinct set of protein coat and subunit COPII coat sar1, and goes from ER to cis-Golgi, secretory, and anterograde transport COPI coat ARF, cis-Golgi to ER, Golgi to Golgi, Golgi to vesicles (to plasma membrane), Golgi back to ER by retrograde transport) Clathrin coats ARF, from trans-Golgi to Endosomes/lysosomes by endocytosis What is vesicle budding initiated by? I. GTP-binding protein (ARF, Sar) these two different proteins are involved with different coat proteins II. Binding of coat protein (clathrin, COP1, COPII) III. Binding of Cargo (if the cargo membrane is bound) or binding of a cargo-receptor protein (if the protein is soluble) IV. Coat proteins shed as vesicle diffuses towards target, exposing v-SNARE What happens when vesicle fusion occurs? Newly exposed v-SNARE (vesicle) interact with t-SNARE (target) on target membrane Interaction allows for docking and fusion of vesicle and target membranes Early stages of the secretory pathway Vesicle transport is occurring between the ER and cis-Golgi which is called the initial transport stage of the secretory pathway. COPII-coated vesicles are transporting newly synthesized proteins containing Golgi-targeting sequences in their cytosolic domain or bound to such protein (anterograde/forward direction). ER to Golgi. COPI-coated vesicles are carrying ER/Golgi-resident proteins in the retrograde/backward direction. Golgi to ER. They function to retrieve v-SNARE proteins, membranes, and mis-sorted ER-resident proteins Later Stages of the Secretory Pathway This occurs in the trans-Golgi network, and involves a distal sorting compartment that sorts proteins into five different types of vesicles for transport to the plasma membrane, endosomes, and lysosomes

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BIOL 4100 EXAM 2 STUDY GUIDE QUESTIONS AND ANSWERS

WITH COMPLETE SOLUTIONS VERIFIED LATEST UPDATE

Secretory and Endocytic pathway protein trafficking

transporting vesicles and transporting membrane and soluble proteins from one

membrane-bounded compartment to another. The transport vesicles collect cargo

proteins in membrane budding from a donor compartment and deliver the cargo

proteins to the next compartment by fusing with the target membrane.

Secretory Pathway

It involves the ER and is moving outward, your distributing soluble and membrane

proteins that are synthesized in the rough ER to the final destination at the cells surface,

this also includes secretion, and going into the lysosomes.It has two stages. ER to Golgi

to Cell Surface to Endosomes to Lysosomes

Endocytic Pathway

· moving inward or taking something up from outside of the cell, ingestion and

degradation of extracellular molecules, can involve a cell taking up a pathogen. Goes

from plasma membrane to endosomes to lysosomes

Golgi

Key player in the biosynthetic secretory and endocytic pathway

Functions of Golgi

receiving transport vesicles from the ER, modifying proteins by glycosylation, and

dispatching secretory proteins in vesicles bound for the extracellular space, PM (plasma

membrane), or lysosome

,Golgi Cis, or forming face

entry face where the proteins from the ER enter the Golgi

Golgi Trans face

exit face, where the proteins leave the Golgi and go into their destined place such as

secretory vesicles, plasma membrane, or lysosomes

How does the Golgi work?

delivers proteins to the cell exterior via vesicles by unregulated secretion, secretory

vesicles whose movement to the plasma membrane/cell exterior can be regulated

(regulated secretion), or endosomes that mature into lysosomes

Coat function

concentrate transport proteins into specialized patches, and mold the forming vesicle

into curved shape

What are the three major coat types?

COPI, COPII, and clathrin coats

The three major types of transport vesicles each have?

different types of protein coat that are formed by a reversible polymerization of a distinct

set of protein coat and subunit

COPII coat

sar1, and goes from ER to cis-Golgi, secretory, and anterograde transport

COPI coat

ARF, cis-Golgi to ER, Golgi to Golgi, Golgi to vesicles (to plasma membrane), Golgi

back to ER by retrograde transport)

Clathrin coats

, ARF, from trans-Golgi to Endosomes/lysosomes by endocytosis

What is vesicle budding initiated by?

I. GTP-binding protein (ARF, Sar) these two different proteins are involved with different

coat proteins

II. Binding of coat protein (clathrin, COP1, COPII)

III. Binding of Cargo (if the cargo membrane is bound) or binding of a cargo-receptor

protein (if the protein is soluble)

IV. Coat proteins shed as vesicle diffuses towards target, exposing v-SNARE

What happens when vesicle fusion occurs?

Newly exposed v-SNARE (vesicle) interact with t-SNARE (target) on target membrane

Interaction allows for docking and fusion of vesicle and target membranes

Early stages of the secretory pathway

Vesicle transport is occurring between the ER and cis-Golgi which is called the initial

transport stage of the secretory pathway. COPII-coated vesicles are transporting newly

synthesized proteins containing Golgi-targeting sequences in their cytosolic domain or

bound to such protein (anterograde/forward direction). ER to Golgi. COPI-coated

vesicles are carrying ER/Golgi-resident proteins in the retrograde/backward direction.

Golgi to ER. They function to retrieve v-SNARE proteins, membranes, and mis-sorted

ER-resident proteins

Later Stages of the Secretory Pathway

This occurs in the trans-Golgi network, and involves a distal sorting compartment that

sorts proteins into five different types of vesicles for transport to the plasma membrane,

endosomes, and lysosomes

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