ANSWERS WITH COMPLETE SOLUTIONS VERIFIED
Synonymous SNV
base change does NOT result in amino acid change e.g. CGT>CGC is still Arginine (R)
Missense SNV
base change does result in amino acid change e.g. CGT>CAC changes Arginine (R) to
Histidine (H)
Nonsense SNV
base change result in a premature stop codon
Splice SNV
Mutation is at the exon-intron border and might affect splicing (turn exon to intron and
vis versa)
Intronic SNV
SNV occurs in gene introns
Intergenic SNV
SNV occurs in regions between genes
3'UTR SNV
SNV occurs in 3' UTR (may affect transcription or translation)
5'UTR SNV
SNV occurs in 5' UTR (may affect transcription or translation)
Indel
, Generally refers to insertion or deletions up to 100bp. Can be up to 1Mb
Microsatellites vs copy number varients
add more copies to each alleles. Affect more than two. CNV make larger duplications
What happens to translocations during Meiosis?
Chromosome form cross like structures that align with complementary parts. The
chromosomes will then split in different ways. Some will be more viable as they are
more balanced as in they have one copy of each gene where some will not
CNV and Human Disease
There have been associations between regions with CNV and human disease. This
may be due to gene dosage effects or changes in the expression of genes with the CNV
region
Nullisomy Aneuploidy
loss of both members of a homologous pair of chromosomes; 2n − 2
Monosomy Aneuploidy
loss of a single chromosome; 2n − 1
Trisomy Aneuploidy
gain of a single chromosome; 2n + 1
Tetrasomy
gain of two homologous chromosomes; 2n + 2
Uniparental disomy
both chromosomes are inherited form the same parent.
Partial aneuploidy
Some of the chromosome is missing